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SARS-CoV-2 entry factors are highly expressed in nasal epithelial cells together with innate immune genes

Authors: Sungnak W.; Huang N.; Becavin C.; Berg M.; Queen R.; Litvinukova M.; Talavera-Lopez C.; +73 Authors

SARS-CoV-2 entry factors are highly expressed in nasal epithelial cells together with innate immune genes

Abstract

We investigated SARS-CoV-2 potential tropism by surveying expression of viral entry-associated genes in single-cell RNA-sequencing data from multiple tissues from healthy human donors. We co-detected these transcripts in specific respiratory, corneal and intestinal epithelial cells, potentially explaining the high efficiency of SARS-CoV-2 transmission. These genes are co-expressed in nasal epithelial cells with genes involved in innate immunity, highlighting the cells' potential role in initial viral infection, spread and clearance. The study offers a useful resource for further lines of inquiry with valuable clinical samples from COVID-19 patients and we provide our data in a comprehensive, open and user-friendly fashion at www.covid19cellatlas.org.

Keywords

1300 Biochemistry, Immunology, PROTEIN, Genetics and Molecular Biology, CORONAVIRUS, General Biochemistry, Genetics and Molecular Biology, Nasal epithelial cells, HCA Lung Biological Network, Síndrome respiratorio agudo grave, FUNCTIONAL RECEPTOR, Virology, Cell Behavior (q-bio.CB), Transcriptomics, QH3011 Biochemistry / biokémia, SARS-CoV-2, COVID-19, General Medicine, Coronavirus, [SDV] Life Sciences [q-bio], WUHAN, FOS: Biological sciences, General Biochemistry, Células epiteliales nasales, Quantitative Biology - Cell Behavior

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    influence
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
2K
Top 0.01%
Top 0.01%
Top 0.01%
Green
hybrid