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Development Growth & Differentiation
Article . 2005 . Peer-reviewed
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Characterization of an exchangeable gene trap using pU‐17 carrying a stop codon‐βgeo cassette

Authors: Yumi Soejima; Tomohisa Sekimoto; Ayako Utoh; Masatake Araki; Kyoko Haruna; Takuya Taniwaki; Hiroshi Nakamura; +7 Authors

Characterization of an exchangeable gene trap using pU‐17 carrying a stop codon‐βgeo cassette

Abstract

We have developed a new exchangeable gene trap vector, pU‐17, carrying the intron‐lox71‐splicing acceptor (SA)‐βgeo‐loxP‐pA‐lox2272‐pSP73‐lox511. The SA contains three stop codons in‐frame with the ATG of βgalactosidase/neomycin‐resistance fusion gene (βgeo) that can function in promoter trapping. We found that the trap vector was highly selective for integrations in the introns adjacent to the exon containing the start codon. Furthermore, by using the Cre‐mutant lox system, we successfully replaced the βgeo gene with the enhanced green fluorescent protein (EGFP) gene, established mouse lines with the replaced clones, removed the selection marker gene by mating with Flp‐deleter mice, and confirmed that the replaced EGFP gene was expressed in the same pattern as the βgeo gene. Thus, using this pU‐17 trap vector, we can initially carry out random mutagenesis, and then convert it to a gain‐of‐function mutation by replacing the βgeo gene with any gene of interest to be expressed under the control of the trapped promoter through Cre‐mediated recombination.

Related Organizations
Keywords

Genetic Markers, Extracellular Matrix Proteins, DNA, Complementary, Base Sequence, Reverse Transcriptase Polymerase Chain Reaction, Sequence Analysis, RNA, Stem Cells, DNA Mutational Analysis, Genetic Vectors, Green Fluorescent Proteins, Histological Techniques, Molecular Sequence Data, Computational Biology, Protein-Lysine 6-Oxidase, Mice, Genes, Reporter, Animals, RNA Splice Sites, DNA Primers

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    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    59
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Top 10%
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Top 10%
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Top 10%
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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
59
Top 10%
Top 10%
Top 10%
bronze