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Chromosome-scale genome assembly the tropical abalone (Haliotis asinina)

Authors: Roy Barkan; Ira R Cooke; Sue-Ann Watson; Sally C. Y. Lau; Jan M Strugnell;

Chromosome-scale genome assembly the tropical abalone (Haliotis asinina)

Abstract

Abalone (family Haliotidae) are an ecologically and economically significant group of marine gastropods that can be found in tropical and temperate waters. To date, only a fewHaliotisgenomes are available, all belonging to temperate species. Here, we provide the first reference genome of the tropical abaloneHaliotis asinina. The combination of PacBio long-read HiFi sequencing and Dovetail Omni-C sequencing allowed the chromosome-level assembly of this genome, while PacBio Isoform sequencing across five tissue types enabled the construction of high-quality gene models. This assembly resulted in 16 pseudo-chromosomes spanning over 1.12 Gb (98.1% of total scaffolds length), N50 of 67.09 Mb, the longest scaffold length of 105.96 Mb, and a BUSCO completeness score of 97.6%. This study identified 25,422 protein-coding genes and 61,149 transcripts. In an era of climate change and ocean warming, this genome of a heat-tolerant species can be used for comparative genomics with a focus on thermal resistance. This high-quality reference genome ofH. asininais a valuable resource for aquaculture, fisheries, and ecological studies.

Related Organizations
Keywords

Data Descriptor, Genome, Science, Q, Gastropoda, Animals, Chromosomes

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
5
Top 10%
Average
Top 10%
Green
hybrid