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Journal of Biological Chemistry
Article . 2017 . Peer-reviewed
License: CC BY
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Journal of Biological Chemistry
Article
License: CC BY
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A pivotal role for a conserved bulky residue at the α1-helix of the αI integrin domain in ligand binding

Authors: Zhengli, Wang; Aye Myat Myat, Thinn; Jieqing, Zhu;

A pivotal role for a conserved bulky residue at the α1-helix of the αI integrin domain in ligand binding

Abstract

The ligand-binding βI and αI domains of integrin are the best-studied von Willebrand factor A domains undergoing significant conformational changes for affinity regulation. In both βI and αI domains, the α1- and α7-helixes work in concert to shift the metal-ion-dependent adhesion site between the resting and active states. An absolutely conserved Gly in the middle of the α1-helix of βI helps maintain the resting βI conformation, whereas the homologous position in the αI α1-helix contains a conserved Phe. A functional role of this Phe is structurally unpredictable. Using αLβ2 integrin as a model, we found that the residue volume at the Phe position in the α1-helix is critical for αLβ2 activation because trimming the Phe by small amino acid substitutions abolished αLβ2 binding with soluble and immobilized intercellular cell adhesion molecule 1. Similar results were obtained for αMβ2 integrin. Our experimental and molecular dynamics simulation data suggested that the bulky Phe acts as a pawl that stabilizes the downward ratchet-like movement of β6-α7 loop and α7-helix, required for high-affinity ligand binding. This mechanism may apply to other von Willebrand factor A domains undergoing large conformational changes. We further demonstrated that the conformational cross-talk between αL αI and β2 βI could be uncoupled because the β2 extension and headpiece opening could occur independently of the αI activation. Reciprocally, the αI activation does not inevitably lead to the conformational changes of the β2 subunit. Such loose linkage between the αI and βI is attributed to the αI flexibility and could accommodate the αLβ2-mediated rolling adhesion of leukocytes.

Keywords

Models, Molecular, Protein Conformation, alpha-Helical, Binding Sites, CD11b Antigen, Protein Conformation, Phenylalanine, Integrin alpha1, Molecular Dynamics Simulation, Intercellular Adhesion Molecule-1, Ligands, Kinetics, Immobilized Proteins, Amino Acid Substitution, CD18 Antigens, Mutation, Humans, Protein Interaction Domains and Motifs, Amino Acid Sequence, Protein Multimerization, Conserved Sequence

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
10
Top 10%
Average
Top 10%
gold