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Acta Crystallographica Section F Structural Biology and Crystallization Communications
Article . 2013 . Peer-reviewed
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Crystallization and preliminary X-ray diffraction analyses of the TIR domains of three TIR–NB–LRR proteins that are involved in disease resistance inArabidopsis thaliana

Authors: Wan, Li; Zhang, Xiaoxiao; Williams, Simon J.; Ve, Thomas; Bernoux, Maud; Sohn, Kee Hoon; Jones, Jonathan D. G.; +2 Authors

Crystallization and preliminary X-ray diffraction analyses of the TIR domains of three TIR–NB–LRR proteins that are involved in disease resistance inArabidopsis thaliana

Abstract

The Toll/interleukin-1 receptor (TIR) domain is a protein-protein interaction domain that is found in both animal and plant immune receptors. The N-terminal TIR domain from the nucleotide-binding (NB)-leucine-rich repeat (LRR) class of plant disease-resistance (R) proteins has been shown to play an important role in defence signalling. Recently, the crystal structure of the TIR domain from flax R protein L6 was determined and this structure, combined with functional studies, demonstrated that TIR-domain homodimerization is a requirement for function of the R protein L6. To advance the molecular understanding of the function of TIR domains in R-protein signalling, the protein expression, purification, crystallization and X-ray diffraction analyses of the TIR domains of the Arabidopsis thaliana R proteins RPS4 (resistance to Pseudomonas syringae 4) and RRS1 (resistance to Ralstonia solanacearum 1) and the resistance-like protein SNC1 (suppressor of npr1-1, constitutive 1) are reported here. RPS4 and RRS1 function cooperatively as a dual resistance-protein system that prevents infection by three distinct pathogens. SNC1 is implicated in resistance pathways in Arabidopsis and is believed to be involved in transcriptional regulation through its interaction with the transcriptional corepressor TPR1 (Topless-related 1). The TIR domains of all three proteins have successfully been expressed and purified as soluble proteins in Escherichia coli. Plate-like crystals of the RPS4 TIR domain were obtained using PEG 3350 as a precipitant; they diffracted X-rays to 2.05 Å resolution, had the symmetry of space group P1 and analysis of the Matthews coefficient suggested that there were four molecules per asymmetric unit. Tetragonal crystals of the RRS1 TIR domain were obtained using ammonium sulfate as a precipitant; they diffracted X-rays to 1.75 Å resolution, had the symmetry of space group P4(1)2(1)2 or P4(3)2(1)2 and were most likely to contain one molecule per asymmetric unit. Crystals of the SNC1 TIR domain were obtained using PEG 3350 as a precipitant; they diffracted X-rays to 2.20 Å resolution and had the symmetry of space group P4(1)2(1)2 or P4(3)2(1)2, with two molecules predicted per asymmetric unit. These results provide a good foundation to advance the molecular and structural understanding of the function of the TIR domain in plant innate immunity.

Keywords

1303 Biochemistry, 3104 Condensed Matter Physics, disease resistance, 572, Arabidopsis thaliana, crystallization, Keywords: Arabidopsis protein, Molecular Sequence Data, Plant innate immunity, Arabidopsis, SNC1, Toll/interleukin-1 receptor domain, allergic reaction, chemistry, immunology, 1315 Structural Biology, 1311 Genetics, X-Ray Diffraction, Amino Acid Sequence, plant disease, Disease Resistance, Plant Diseases, Resistance proteins, Arabidopsis Proteins, microbiology, article, Other chemical sciences not elsewhere classified, protein terti Arabidopsis thaliana, amino acid sequence, Protein Structure, Tertiary, RPS4, molecular genetics, Hypersensitive response, plant immunity, Crystallization, metabolism, Sequence Alignment, 1304 Biophysics, RRS1

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
5
Average
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