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Quantitative analysis of snoRNA association with pre‐ribosomes and release of snR30 by Rok1 helicase

Authors: Bohnsack, Markus; Kos, Martin; Tollervey, David;

Quantitative analysis of snoRNA association with pre‐ribosomes and release of snR30 by Rok1 helicase

Abstract

In yeast, three small nucleolar RNAs (snoRNAs) are essential for the processing of pre‐ribosomal RNA—U3, U14 and snR30—whereas 72 non‐essential snoRNAs direct site‐specific modification of pre‐rRNA. We applied a quantitative screen for alterations in the pre‐ribosome association to all 75 yeast snoRNAs in strains depleted of eight putative helicases implicated in 40S subunit synthesis. For the modification‐guide snoRNAs, we found no clear evidence for the involvement of these helicases in the association or dissociation of pre‐ribosomes. However, the DEAD box helicase Rok1 was required specifically for the release of snR30. Point mutations in motif I, but not in motif III, of the helicase domain of Rok1 impaired the release of snR30, but this was less marked than in strains depleted of Rok1, and resulted in a dominant‐negative growth phenotype. Dissociation of U3 and U14 from pre‐ribosomes is also dependent on helicases, suggesting that release of the essential snoRNAs might differ mechanistically from release of the modification‐guide snoRNAs.

Keywords

570, /dk/atira/pure/subjectarea/asjc/1300/1303, /dk/atira/pure/subjectarea/asjc/1300/1311, Saccharomyces cerevisiae Proteins, /dk/atira/pure/subjectarea/asjc/1300/1312, Scientific Report, Amino Acid Motifs, Genetic Complementation Test, RNA, Fungal, Saccharomyces cerevisiae, Biochemistry, DEAD-box RNA Helicases, Molecular Weight, Mutation, Genetics, RNA, Small Nucleolar, ddc:570, Molecular Biology, Ribosomes, ddc: ddc:570

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
69
Top 10%
Top 10%
Top 10%
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gold