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Proceedings of the National Academy of Sciences
Article . 1999 . Peer-reviewed
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Complementation of plant mutants with large genomic DNA fragments by a transformation-competent artificial chromosome vector accelerates positional cloning

Authors: Y G, Liu; Y, Shirano; H, Fukaki; Y, Yanai; M, Tasaka; S, Tabata; D, Shibata;

Complementation of plant mutants with large genomic DNA fragments by a transformation-competent artificial chromosome vector accelerates positional cloning

Abstract

To accelerate gene isolation from plants by positional cloning, vector systems suitable for both chromosome walking and genetic complementation are highly desirable. Therefore, we developed a transformation-competent artificial chromosome (TAC) vector, pYLTAC7, that can accept and maintain large genomic DNA fragments stably in both Escherichia coli and Agrobacterium tumefaciens . Furthermore, it has the cis sequences required for Agrobacterium -mediated gene transfer into plants. We cloned large genomic DNA fragments of Arabidopsis thaliana into the vector and showed that most of the DNA fragments were maintained stably. Several TAC clones carrying 40- to 80-kb genomic DNA fragments were transferred back into Arabidopsis with high efficiency and shown to be inherited faithfully among the progeny. Furthermore, we demonstrated the practical utility of this vector system for positional cloning in Arabidopsis . A TAC contig was constructed in the region of the SGR1 locus, and individual clones with ca. 80-kb inserts were tested for their ability to complement the gravitropic defects of a homozygous mutant line. Successful complementation enabled the physical location of SGR1 to be delimited with high precision and confidence.

Keywords

Base Sequence, DNA, Plant, Genetic Complementation Test, Genetic Vectors, Homozygote, Molecular Sequence Data, Restriction Mapping, Arabidopsis, Gene Transfer Techniques, Chromosome Mapping, Mutagenesis, Insertional, Transformation, Genetic, Agrobacterium tumefaciens, Mutation, Escherichia coli, Cloning, Molecular, Promoter Regions, Genetic, Polymorphism, Restriction Fragment Length, Gene Library

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
215
Top 1%
Top 1%
Top 1%
bronze