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Single nucleotide polymorphisms in thymic stromal lymphopoietin gene are not associated with allergic rhinitis susceptibility in Chinese subjects

Authors: Luo Zhang; Luo Zhang; Yanming Zhao; Xiaohong Song; Xiaohong Song; Yuan Zhang; Yuan Zhang; +1 Authors

Single nucleotide polymorphisms in thymic stromal lymphopoietin gene are not associated with allergic rhinitis susceptibility in Chinese subjects

Abstract

Thymic stromal lymphopoietin (TSLP) is an epithelial cell-derived cytokine, implicated in the development and progression of allergic diseases. Recent studies have demonstrated significantly increased expression and synthesis of TSLPin nasal mucosa of patients with allergic rhinitis (AR), compared with nonallergic control subjects. Also, there is significant correlation between the level of TSLP mRNA and symptom severity in AR patients. In this study, we investigated whether polymorphisms in the TSLP gene were associated with increased risk of AR in the Chinese population.In a candidate gene association study, we tested 11 single nucleotide polymorphisms (SNPs) in the TSLP gene in 368 AR and 325 control adult Han Chinese subjects from Beijing. The 11 SNPs were selected from the Chinese HapMap genotyping dataset to ensure complete genetic coverage. AR was established by questionnaire and clinical examination, and blood was drawn from all subjects for DNA extraction. The PLINK software package was used to perform statistical testing.In the single-locus analysis of AR risk, no significant differences in allele and genotype frequencies were found between AR and control subjects. Further logistic regression analyses adjusted for age and gender also failed to reveal significant associations between AR and the selected SNPs. Similarly, analysis stratified by gender, and haplotype or diplotype did not reveal any association with AR risk.Although TSLP presents itself as a good candidate for contributing to allergy, this study failed to find an association between specific SNPs in the TSLP gene and AR susceptibility in the Han Chinese population.

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Keywords

EXPRESSION, Adult, Male, Genotyping, China, Adolescent, Genotype, QH426-470, Polymerase Chain Reaction, Polymorphism, Single Nucleotide, Allergic rhinitis, Linkage Disequilibrium, Young Adult, Thymic stromal lymphopoietin, INFLAMMATION, Thymic Stromal Lymphopoietin, Risk Factors, Genetics, HUMAN GENOME, Humans, EPISTASIS, Genetics(clinical), Genetic Predisposition to Disease, Internal medicine, POPULATION, Aged, Chinese subjects, Biology and Life Sciences, Rhinitis, Allergic, Seasonal, Middle Aged, Prognosis, RC31-1245, AIRWAY EPITHELIAL-CELLS, Single nucleotide polymorphism, ARIA 2008, TSLP, Case-Control Studies, ASTHMA, Cytokines, Female, DISEQUILIBRIUM, Research Article

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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
10
Average
Average
Top 10%
Green
gold