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figshare
Dataset . 2020
License: CC BY
Data sources: Datacite
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Smithsonian figshare
Dataset . 2020
License: CC BY
Data sources: Bielefeld Academic Search Engine (BASE)
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The Bacillus antharcis cgMLST scheme and the typing results of 584 strains produced with ChewBBACA.

Research datakeyboard_double_arrow_right Dataset 01 Jan 2020Publisher:figshare
Authors: Abdel-Glil, Mostafa;

doi: 10.6084/m9.figshare.13220735.v1

The Bacillus antharcis cgMLST scheme and the typing results of 584 strains produced with ChewBBACA.

Abstract

The folder contains the Bacillus antharcis cgMLST genes and the typing results of 584 B. anthracis strains. The schema was originally created with SeqSphere and formatted for use with the chewBBACA software as an alternative command line-based open-source program for allele calling. The snakemake application of chewBBACA, called chewieSnake v2.0.0-52-g01c32bb (accessed in July 2020; https://gitlab.com/bfr_bioinformatics/chewieSnake) was used, and the typing results are summarised in an html report written by Carlus Deneke. This scheme is also available and can be used via PubMLST database (https://pubmlst.org/organisms/bacillus-cereus).

Keywords

Veterinary Medicine, Epidemiology, Bacillus anthracis Ames, Bacillus anthracis Sterne, anthrax surveillance, outbreak analysis, Medical Bacteriology

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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average