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European Journal of Immunology
Article . 2008 . Peer-reviewed
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Vβ cluster sequences reduce the frequency of primary Vβ2 and Vβ14 rearrangements

Authors: Frederick W. Alt; Frederick W. Alt; Scott Whitlow; Scott Whitlow; Raul Mostoslovasky; Craig H. Bassing; Katherine S. Yang-Iott; +2 Authors

Vβ cluster sequences reduce the frequency of primary Vβ2 and Vβ14 rearrangements

Abstract

AbstractT‐cell receptor (TCR) β variable region exons are assembled from numerous gene segments in a highly ordered and regulated manner. To elucidate mechanisms and identify cis‐acting elements that control Vβ rearrangement, we generated an endogenous TCR‐β allele with only the Vβ2, Vβ4, and Vβ14 segments. We found that αβ T lineage cells containing this Vβ2–4–14 allele and a wild‐type TCR‐β allele developed normally, but exhibited a significant increase in Vβ2+ and Vβ14+ cells. To quantify Vβ rearrangements on the Vβ2–4–14 allele, we generated αβ T‐cell hybridomas and analyzed TCR‐β rearrangements. Despite the deletion of almost all Vβ segments and 234 kb of Vβ cluster sequences, the Vβ2–4–14 allele exhibited only a slight decrease in Vβ rearrangement as compared with the wild‐type TCR‐β allele. Thus, cis‐acting control elements essential for directing Vβ rearrangement across large chromosomal distances are not located within the Vβ cluster. We also found a significant increase in the frequency of Vβ rearrangements involving Vβ2 and Vβ14, but not Vβ4, on the Vβ2–4–14 allele. Collectively, our data suggest that Vβ cluster sequences reduce the frequency of Vβ2 and Vβ14 rearrangements by competing with the productive coupling of accessible Vβ2 and Vβ14 segments with DJβ1 complexes.

Keywords

Mice, Receptors, Antigen, T-Cell, alpha-beta, T-Lymphocytes, Genes, T-Cell Receptor beta, Animals, Gene Rearrangement, beta-Chain T-Cell Antigen Receptor, Alleles

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    citations
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    14
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    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Average
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
14
Average
Average
Top 10%
bronze