
A disease-causing G-to-T transversion at position +6 of BRCA1 exon 18 induces exclusion of the exon from the mRNA and, as has been suggested by in silico analysis, disrupts an ASF/SF2-dependent splicing enhancer. We show here using a pulldown assay with an internal standard that wild-type (WT) and mutant T6 sequences displayed similar ASF/SF2 binding efficiencies, which were significantly lower than that of a typical exonic splicing enhancer derived from the extra domain A exon of fibronectin. Overexpression or small interfering RNA (siRNA)-mediated depletion of ASF/SF2 did not affect the splicing of a WT BRCA1 minigene but resulted in an increase and decrease of T6 exon 18 inclusion, respectively. Furthermore, extensive mutation analysis using hybrid minigenes indicated that the T6 mutant creates a sequence with a prevalently inhibitory function. Indeed, RNA-protein interaction and siRNA experiments showed that the skipping of T6 BRCA1 exon 18 is due to the creation of a splicing factor-dependent silencer. This sequence specifically binds to the known repressor protein hnRNPA1/A2 and to DAZAP1, the involvement of which in splicing inhibition we have demonstrated. Our results indicate that the binding of the splicing factors hnRNPA1/A2 and DAZAP1 is the primary determinant of T6 BRCA1 exon 18 exclusion.
Base Sequence, Serine-Arginine Splicing Factors, BRCA1 Protein, Heterogeneous Nuclear Ribonucleoprotein A1, Molecular Sequence Data, Nuclear Proteins, RNA-Binding Proteins, Exons, Cell Line, Alternative Splicing, Heterogeneous-Nuclear Ribonucleoprotein Group A-B, Mutation, Humans, Gene Silencing, RNA, Small Interfering
Base Sequence, Serine-Arginine Splicing Factors, BRCA1 Protein, Heterogeneous Nuclear Ribonucleoprotein A1, Molecular Sequence Data, Nuclear Proteins, RNA-Binding Proteins, Exons, Cell Line, Alternative Splicing, Heterogeneous-Nuclear Ribonucleoprotein Group A-B, Mutation, Humans, Gene Silencing, RNA, Small Interfering
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