
pmid: 22140165
A Gram-positive, non-motile, endophytic actinomycete, designated strain YIM 63638T, was isolated from the surface-sterilized roots of Artemisia annua L. The isolate grew optimally with 1–3 % (w/v) NaCl, at pH 6.0–7.0 and at 20–37 °C. Comparative analysis of the 16S rRNA gene sequence showed that the isolate belonged to the genus Pseudonocardia and showed highest sequence similarity with Pseudonocardia oroxyli D10T (98.9 %), Pseudonocardia ailaonensis YIM 45505T (98.3 %) and Pseudonocardia halophobica IMSNU 21327T (98.0 %). Phylogenetic distance from other type strains of species with validly published names within the genus Pseudonocardia was greater than 2.3 %. Strain YIM 63638T had a genomic DNA G+C content of 72.1 mol% and MK-8(H4) as the predominant respiratory quinone. The major fatty acids were iso-C16 : 0 (36.32 %) and 10-methyl-C16 : 0 (19.78 %). On the basis of phenotypic properties and phylogenetic distinctiveness, strain YIM 63638T represents a novel species of the genus Pseudonocardia , for which the name Pseudonocardia xishanensis sp. nov. is proposed. The type strain is YIM 63638T ( = JCM 17906T = KCTC 29005T).
DNA, Bacterial, Base Composition, Fatty Acids, Molecular Sequence Data, Quinones, Sequence Analysis, DNA, Artemisia annua, Plant Roots, Bacterial Typing Techniques, RNA, Ribosomal, 16S, Actinomycetales, Endophytes, Phylogeny
DNA, Bacterial, Base Composition, Fatty Acids, Molecular Sequence Data, Quinones, Sequence Analysis, DNA, Artemisia annua, Plant Roots, Bacterial Typing Techniques, RNA, Ribosomal, 16S, Actinomycetales, Endophytes, Phylogeny
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