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Pseudonocardia xishanensis sp. nov., an endophytic actinomycete isolated from the roots of Artemisia annua L.

Authors: Guo-Zhen, Zhao; Jie, Li; Wen-Yong, Zhu; Da-Qiao, Wei; Jin-Li, Zhang; Li-Hua, Xu; Wen-Jun, Li;

Pseudonocardia xishanensis sp. nov., an endophytic actinomycete isolated from the roots of Artemisia annua L.

Abstract

A Gram-positive, non-motile, endophytic actinomycete, designated strain YIM 63638T, was isolated from the surface-sterilized roots of Artemisia annua L. The isolate grew optimally with 1–3 % (w/v) NaCl, at pH 6.0–7.0 and at 20–37 °C. Comparative analysis of the 16S rRNA gene sequence showed that the isolate belonged to the genus Pseudonocardia and showed highest sequence similarity with Pseudonocardia oroxyli D10T (98.9 %), Pseudonocardia ailaonensis YIM 45505T (98.3 %) and Pseudonocardia halophobica IMSNU 21327T (98.0 %). Phylogenetic distance from other type strains of species with validly published names within the genus Pseudonocardia was greater than 2.3 %. Strain YIM 63638T had a genomic DNA G+C content of 72.1 mol% and MK-8(H4) as the predominant respiratory quinone. The major fatty acids were iso-C16 : 0 (36.32 %) and 10-methyl-C16 : 0 (19.78 %). On the basis of phenotypic properties and phylogenetic distinctiveness, strain YIM 63638T represents a novel species of the genus Pseudonocardia , for which the name Pseudonocardia xishanensis sp. nov. is proposed. The type strain is YIM 63638T ( = JCM 17906T = KCTC 29005T).

Related Organizations
Keywords

DNA, Bacterial, Base Composition, Fatty Acids, Molecular Sequence Data, Quinones, Sequence Analysis, DNA, Artemisia annua, Plant Roots, Bacterial Typing Techniques, RNA, Ribosomal, 16S, Actinomycetales, Endophytes, Phylogeny

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Powered by OpenAIRE graph
Found an issue? Give us feedback
selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
18
Top 10%
Average
Top 10%
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