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Dataset . 2020
License: CC BY
Data sources: Datacite
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Dataset . 2020
License: CC BY
Data sources: Datacite
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Additional file 2 of 3D genome architecture coordinates trans and cis regulation of differentially expressed ear and tassel genes in maize

Research datakeyboard_double_arrow_right Dataset 01 Jan 2020Publisher:figshare
Authors: Sun, Yonghao; Dong, Liang; Zhang, Ying; Lin, Da; Xu, Weize; Ke, Changxiong; Han, Linqian; +5 Authors

doi: 10.6084/m9.figshare.12495464.v1 , 10.6084/m9.figshare.12495464

Additional file 2 of 3D genome architecture coordinates trans and cis regulation of differentially expressed ear and tassel genes in maize

Abstract

Additional file 2: Table S1. Summary of data generated in this study. Table S2. Open chromatin regions in ear. Table S3. Open chromatin regions in tassel. Table S4. Differentially expressed gene with their changed epigenetic feature and bound TF in ear and tassel. Table S5. Differential OCRs. Table S6. Differential H3K4me3. Table S7. Differential H3K27me3. Table S8. Genes co-bound by TFs in ear. Table S9. Chromatin loops in ear. Table S10. Chromatin loops in tassel. Table S11. dOCR-gene loops in ear. Table S12. dOCR-gene loops in tassel. Table S13. Ear-active dOCR-gene loops. Table S14. Tassel-active dOCR-gene loops. Table S15. The number of genes looped by dOCRs. Table S16. The number of tissue-enriched genes looped by tissue-active dOCRs. Table S17. Significant ear and tassel trait-associated SNPs used for analysis.

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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