
Copyright information:Taken from "Phytophthora functional genomics database (PFGD): functional genomics of –plant interactions"Nucleic Acids Research 2005;34(Database issue):D465-D470.Published online 28 Dec 2005PMCID:PMC1347481.© The Author 2006. Published by Oxford University Press. All rights reserved Information flow starts with DNA sequences from or solanaceous plants (such as tomato and potato). DNA sequences are annotated either by transcript sequence pipeline or genomic sequence pipeline developed at NCGR. Annotation data for are deposited in the PFGD, and for tomato and potato, in the Solanaceae Genome Database (SolGD). Both databases have similar user interfaces accessed through the Internet via a web browser, starting with a sequence search on the Query Page. Users can then inspect annotated data by activating appropriate feature links associated with a sequence. PFGD contains a facility for users to enter functional analysis data of UniORF sequences that are used in their experiments, while SolGD is furnished with microarray data from –Solanaceae interactions. PFGD and SolGD are interlinked so that users can seamlessly browse the data between the two databases.
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