<script type="text/javascript">
<!--
document.write('<div id="oa_widget"></div>');
document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=undefined&type=result"></script>');
-->
</script>
This paper , accepted for publication in Briefings in Bioinformatics, develops a deep neural network that accepts cell descriptors and molecules of multiple administered drugs and predicts the joint dose-response hypersurface of the combinatorial treatment. Since the dose-response hypersurface over several concentration dimensions fully characterizes the interaction dynamics of the administered drugs, the model is a computational tool that guides the discovery of synergistic treatments. The neural network is a biochemistry-informed universal approximator; it can estimate any shape of a dose-response hypersurface and has desirable invariances built into its architecture. The model excels at interpolating and extrapolating dose-response surfaces; its predictions align well with known mechanisms of action. It is the first model that can estimate joint dose-response hypersurfaces of arbitrarily many drugs, including untried combinations, in the presence of arbitrary, potentially nonlinear interactions between drugs. We release the model itself as well as a database of likely synergistic drug triplets. Our code is available at https://github.com/alonsocampana/PanThera/; the database of likely synergistic drug triplets at https://zenodo.org/records/14001717.
citations This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically). | 0 | |
popularity This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network. | Average | |
influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically). | Average | |
impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network. | Average |