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Biochemistry
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Biochemistry
Article . 2008 . Peer-reviewed
Data sources: Crossref
Biochemistry
Article . 2008
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Structural Transitions of the RING1B C-Terminal Region upon Binding the Polycomb cbox Domain

Authors: Borries Demeler; Virgil Schirf; Udayar Ilangovan; Angela K. Robinson; Andrew P. Hinck; Patricia M. Schwarz; Renjing Wang; +2 Authors

Structural Transitions of the RING1B C-Terminal Region upon Binding the Polycomb cbox Domain

Abstract

Polycomb group (PcG) proteins are required for maintaining cell identity and stem cell self-renewal. RING1B and Polycomb (Pc) are two components of a multiprotein complex called polycomb repression complex 1 (PRC1) that is essential for establishing and maintaining long-term repressed gene states. Here we characterize the interaction between the C-terminal region of RING1B (C-RING1B) and the Pc cbox domain. The C-RING1B-cbox interaction displays a 1:1 stoichiometry with dissociation constants ranging from 9.2 to 180 nM for the different Pc orthologues. NMR analysis of C-RING1B alone reveals line broadening. However, when it is in complex with the cbox domain, there is a striking change to the NMR spectrum indicative of conformational tightening. This conformational change may arise from the organization of the C-RING1B subdomains. The C-terminal regions of all PcG RING1 proteins are composed of two stretches of conserved sequences separated by a variable linker sequence. While the entire C-RING1B region is required for cbox binding, the N- and C-terminal halves of C-RING1B can be separated and are able to interact, suggesting the presence of an intramolecular interaction within C-RING1B. The flexibility within the C-RING1B structure allowing transitions between the intramolecular bound and unbound states may cause the broadened peaks of the C-RING1B NMR spectrum. Binding the cbox domain stabilizes C-RING1B, whereby broadening is eliminated. The presence of flexible regions could allow C-RING1B to bind a variety of different factors, ultimately recruiting RING1B and its associated PcG proteins to different genomic loci.

Keywords

Polycomb Repressive Complex 1, Magnetic Resonance Spectroscopy, Sequence Homology, Amino Acid, Ubiquitin-Protein Ligases, Molecular Sequence Data, Polycomb-Group Proteins, Surface Plasmon Resonance, Models, Biological, Protein Structure, Tertiary, DNA-Binding Proteins, Repressor Proteins, Humans, Electrophoresis, Polyacrylamide Gel, Amino Acid Sequence, Ultracentrifugation, Protein Binding

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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
21
Top 10%
Top 10%
Top 10%
bronze