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A compilation of pathway gene sets: dhimmel/pathways v1.1

integration_instructionsResearch softwarekeyboard_double_arrow_right Software 05 Feb 2016Publisher:Zenodo
Authors: Himmelstein, Daniel S.;

doi: 10.5281/zenodo.45588

A compilation of pathway gene sets: dhimmel/pathways v1.1

Abstract

This release contains minor updates to our compilation of human pathway gene sets. MSigDB was updated from 5.0 to 5.1 which had no effect. WikiPathways was updated which added versioning to pathway IDs. Entrez Genes are now sorted as integers in data/pathways.tsv. This release contains 1624 pathways.

Keywords

gene sets, WikiPathways, MSigDB, pathways, Rephetio

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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