Viewing multiple sequence alignments with the JavaScript Sequence Alignment Viewer (JSAV) [v1; ref status: indexed, http://f1000r.es/4io]
Copyright policy )Viewing multiple sequence alignments with the JavaScript Sequence Alignment Viewer (JSAV) [v1; ref status: indexed, http://f1000r.es/4io]
The JavaScript Sequence Alignment Viewer (JSAV) is designed as a simple-to-use JavaScript component for displaying sequence alignments on web pages. The display of sequences is highly configurable with options to allow alternative coloring schemes, sorting of sequences and ’dotifying’ repeated amino acids. An option is also available to submit selected sequences to another web site, or to other JavaScript code. JSAV is implemented purely in JavaScript making use of the JQuery and JQuery-UI libraries. It does not use any HTML5-specific options to help with browser compatibility. The code is documented using JSDOC and is available from http://www.bioinf.org.uk/software/jsav/.
- Freie Universität Berlin Germany
- Humboldt-Universität zu Berlin Germany
- Charité - University Medicine Berlin Germany
- UNIVERSITY COLLEGE LONDON, Bartlett School of Planning United Kingdom
- Institute of Structural and Molecular Biology, University College London, London, UK United Kingdom
Bioinformatics, Science, Q, R, Medicine, Genomics
Bioinformatics, Science, Q, R, Medicine, Genomics
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