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[Semiempirical calculations of the structure of apamine].

Authors: P N, Mel'nikov; E M, Popov;

[Semiempirical calculations of the structure of apamine].

Abstract

Conformational properties of the neurotoxin apamine were investigated starting from the known amino acid sequence. Nonvalent and electrostatic interactions, hydrogen bonding and torsional energies were computed by variation of all backbone and side chain dihedral angles. In a search for the spatial structure of the molecule, di-, tri-, tetra- etc. fragments were subsequently analyzed. As the result, the apriori calculations of the 15-residue apamine fragment revealed strong energy differentiations of forms. The lowest energy conformation has a folded backbone, with an orientation of Cys-1--Cys-11 and Cys-3--Cys-15 side chain pairs favoring the formation of disulfide bridges.

Keywords

Bee Venoms, Apamin, Macromolecular Substances, Protein Conformation, Neurotoxins, Thermodynamics, Hydrogen Bonding, Disulfides

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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