Honey is the most popular bee product used by man, with nutritional and medicinal purposes. Its great diversity is attributed to numerous factors (bee type, visited flora, environment, and management). The quality of honey is controlled with routine parameters (free acidity, diastase activity, reducing sugars, ash, water, hydroxymethyfurfural, and sucrose contents). Besides the biochemical quality control, a functional profile is also important for pharmacological applications. In this work, bioactive indicators such as the antioxidant activity, flavonoid and polyphenol contents were evaluated by spectrophotometry, and correlated to the content of six bioelements (Ca, Cu, Fe, Mg, Mn, Zn) measured by atomic absorption spectroscopy, tandem FI-FAAS, in 14 unifloral Czech honeys. The antioxidant activity was 43.13 +/- 53.72 micromoles TEAC/100 g honey. The flavonoid content was 5.18 +/- 4.19 mg QE/100 g, and the polyphenol content was 45.38 +/- 27.20 mg GAE/100 g. Buckwheat honey showed the highest values for these indicators of bioactivity, the acacia honeys the lowest, and the rest of the honeys were comprised between both of them. Honey content of bioelements was 138.19 +/- 55.57 ppm Ca (min 77.11-max 261.65), 0.33 +/- 0.41 ppm Cu (min 0.00-max 1.37), 2.95 +/- 1.10 ppm Fe (min 1.34-max 5.36), 35.08 +/- 29.59 ppm Mg (min 8.76-128.06), 4.93 +/- 3.99 ppm Mn (min 0.34-max 11.31), 1.07 +/- 0.56 ppm Zn (min 0.49-max 2.52). The antioxidant activity of honey was significantly correlated to its content of cupper, iron, magnesium, manganese and zinc, but was not correlated to calcium.