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[Bacterial diversity in Zabuye salt lake of tibet by culture-independent approaches].

Authors: Xianhui, Zhang; Fanjing, Kong;

[Bacterial diversity in Zabuye salt lake of tibet by culture-independent approaches].

Abstract

To get knowledge about bacterial diversity in Zabuye salt lake with the culture-independent approaches.Total DNA was extracted from sediments sample of Zabuye salt lake, Tibet. The 16S rRNA gene was amplified by PCR with bacterial primer f530/r1492. Then the plasmid library of 16S rRNA genes was constructed. The positive clones were screened on plates with IPTG/X-gal/Ap. Amplified ribosomal DNA restriction analysis (ARDRA) was carried out with restriction enzymes Hae III, Hha I. With the help of culture-independent approaches, DNA was directly extracted from the sediment samples of Zabuye salt lake. After construction of 16S rRNA gene library, ARDRA (amplified rDNA restriction analysis) analysis was carried out. Some clones were selected to be sequenced according to the ARDRA patterns. These partial sequences of 16S rRNA gene were used for construction of the phylogenetic tree.The phylogenetic tree showed that some clones (57.14% of total clones) belonged to 23 genera in gamma-proteobacteria, alpha-proteobacteria, delta-proteobacteria, bacteroidetes, firmicutes, and verrucomicrobia. The rest clones were quite different and were most related with uncultured sequences, forming special division in the tree.These finding showed much prolific bacteria diversity in Zabuye salt lake.

Related Organizations
Keywords

DNA, Bacterial, Bacteria, RNA, Ribosomal, 16S, Sequence Analysis, DNA, Tibet, Water Microbiology, Polymerase Chain Reaction, Phylogeny

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
2
Average
Average
Average
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