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RETRACTED: The bacterial condensin MukBEF compacts DNA into a repetitive, stable structure.

Authors: Ryan B, Case; Yun-Pei, Chang; Steven B, Smith; Jeff, Gore; Nicholas R, Cozzarelli; Carlos, Bustamante;

RETRACTED: The bacterial condensin MukBEF compacts DNA into a repetitive, stable structure.

Abstract

Condensins are conserved proteins containing SMC (structural maintenance of chromosomes) moieties that organize and compact chromosomes in an unknown mechanism essential for faithful chromosome partitioning. We show that MukBEF, the condensin in Escherichia coli, cooperatively compacts a single DNA molecule into a filament with an ordered, repetitive structure in an adenosine triphosphate (ATP) binding-dependent manner. When stretched to a tension of approximately 17 piconewtons, the filament extended in a series of repetitive transitions in a broad distribution centered on 45 nanometers. A filament so extended and held at a lower force recondensed in steps of 35 nanometers or its multiples; this cycle was repeatable even in the absence of ATP and free MukBEF. Remarkably, the pattern of transitions displayed by a given filament during the initial extension was identical in every subsequent extension. Hence, after being deformed micrometers in length, each filament returned to its original compact structure without the addition of energy. Incubation with topoisomerase I increased the rate of recondensation and allowed the structure to extend and reform almost reversibly, indicating that supercoiled DNA is trapped in the condensed structure. We suggest a new model for how MukBEF organizes the bacterial chromosome in vivo.

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Keywords

DNA, Bacterial, Models, Molecular, Binding Sites, Chemical Phenomena, Chemistry, Physical, Chromosomal Proteins, Non-Histone, DNA, Superhelical, Protein Conformation, Escherichia coli Proteins, Lasers, Microspheres, Repressor Proteins, Protein Subunits, Adenosine Triphosphate, DNA Topoisomerases, Type I, Models, Chemical, Escherichia coli, Nucleic Acid Conformation, Dimerization, Protein Binding

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Powered by OpenAIRE graph
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
39
Top 10%
Top 10%
Top 10%
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