
By computer calculation with the use of atom-atom potentials a stereochemical model of the DNA-hydrate Na+ complex was obtained according to which the Na+(H2O)6 octahedrons are localized in the narrow groove of DNA with formation of a great number of van der vaals contacts and hydrogen bonds. The model explains why the C-form of DNA is stabilized in the Na-DNA complex which is formed in the presence of 80% methanol (v/v). A possibility of the existence of such complexes in vivo at the DNA regions surrounded with media of diminished water activity (the DNA-membrane complex, chromosomes, phage heads) is discussed.
Models, Molecular, Binding Sites, Computers, Nucleic Acid Conformation, Hydrogen Bonding, DNA, Mathematics
Models, Molecular, Binding Sites, Computers, Nucleic Acid Conformation, Hydrogen Bonding, DNA, Mathematics
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