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A new member of the family Closteroviridae identified from symptomatic kiwifruit (Actinidia spp) plants showing multiple viral infection.

Authors: Biccheri, R.; Blouin, A. G.; POGGI POLLINI, CARLO; Cohen, D.; Pearson, M. N.; RATTI, CLAUDIO;

A new member of the family Closteroviridae identified from symptomatic kiwifruit (Actinidia spp) plants showing multiple viral infection.

Abstract

Kiwifruit is an important crop in China, Italy, New Zealand and Chile that collectively contribute for 80% of the world's production. Recent studies demonstrated that Actinidia spp. can be infected by a wide range of pathogens and currently twelve different viral species have been identified on kiwifruit plants. Our studies recently focused on plants of A. chinensis cv Hort 16A showing chlorotic and necrotic rings on leaves followed by a general decline and Death of the scion but not of the rootstock (A. deliciosa cv. Hayward). Pelargonium zonate spot virus, Actinidia virus A, and Actinidia virus B viruses have been detected in samples analyzed and etiology dissection of this complex disorder has been investigated by next Generation sequencing approach. De-novo assembly of raw data from 454 Illumina and Ion Torrent platforms generated a sequence of about 17 kb containing one large ORF carrying two papain-like leader proteases, the methyltransferase, the elicase and the RNA-dependent RNA polymerase. Additional ORFs contain homologues to a heat shock protein 70, a heat shock protein 90, and a silencing suppressor protein and a minor coat protein. However no homologue of a major coat protein has been detected. The genomic organization and the phylogenetic analysis showed that this sequence is related to the olive leaf yellow associated virus, a tentative member of the closterovirus genus. The sequence has been confirmed by cloning of overlapping fragments sequenced by the classical Sanger sequencing. The new viral species identified contributes to the understanding of a disorder observed that has already been associated with significant consequences for yield on kiwifruit plants.

Country
Italy
Keywords

Kiwifruit, Next Generation sequencing, Closterovirus, new viral species in actinidia

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average
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