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Molecular epidemiology of avian pneumovirus strains in Italy

Authors: CATELLI, ELENA; Cecchinato M.; LUPINI, CATERINA; Sperati Ruffoni L.; Pesente P.; Piccirillo A.; Fraciosi C.; +1 Authors

Molecular epidemiology of avian pneumovirus strains in Italy

Abstract

Avian Pneumovirus (APV) infection in Italy is reported from its first appearance in 1987 to present day. The B type virus has been found in different geographical regions but more recently, A type virus has also been detected. To establish the identity and heterogeneity among the APV strains that circulated in Italy, the nucleotide sequences of the Fusion (F) gene were determined and compared with European APV field strains and commonly available vaccine strains. Six B type and one A type Avian Pneumovirus strains isolated in Italy from 1987 to 2004, were grown in chicken embryo tracheal organ cultures (TOC). RNA was extracted from TOC medium and three overlapping RT-PCRs, covering the entire F gene, were performed for further sequencing of the strains. Phylograms for the ~1600 bp sequence were constructed with the MEGA package, version 3.1. As expected, the 6 B type isolates were clustered with the previously published European APV B sequences. Within the group, significant sub clustering was apparent, as the more recent isolates (2001-2004) formed one cluster clearly separated from viruses isolated in the former decade (100% bootstrap).

Country
Italy
Keywords

Phylogenetic analysis; Avian metapneumovirus; Fusion protein gene, AVIAN PNEUMOVIRUS; MOLECULAR CHARACTERIZATION; EPIDEMIOLOGY; ITALY, AVIAN PNEUMOVIRUS; MOLECULAR CHARACTERIZATION; FUSION GENE; ITALY

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average
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