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Characterization of the human AlkB homologue 4 (hABH4)

Authors: Bjørnstad, Linn;

Characterization of the human AlkB homologue 4 (hABH4)

Abstract

The E. coli AlkB protein reverses methylation damage from DNA and RNA by oxidative demethylation, a reaction dependent on Fe(II) and 2-oxoglutarate. Based on sequence similarity, eight human AlkB homologues, denoted hABH1-8, have been identified. hABH2 and hABH3 possess repair activities similar to that of AlkB. While hABH2 is preferentially active on double-stranded DNA substrates, hABH3 is also active on RNA and prefers singlestranded substrates. The functions of hABH1 and hABH4-8 are not yet discovered. These proteins have been suggested to function in regulation of gene expression, by demethylation of 5-methylcytosine on DNA or methylated lysine or arginine residues on histones. Here, the function of hABH4 has been investigated. The enzymatic activity of hABH4 towards 5-methylcytosine was tested in vitro and in vivo. No hABH4-mediated demethylation was observed. Two proteins identified as interactants of hABH4 in by the Yeast Two-Hybrid method, may indicate a role of hABH4 transcriptional regulation. GST pull-down studies were performed to verify these interactions, but a conclusion could not be made because of high background. Further study is needed for determination of the function of hABH4.

Country
Norway
Related Organizations
Keywords

570, hABH4 metylering epigenetiske modifikasjoner, VDP::473, 540

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
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Green