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Nucleic Acids Research
Article . 2009 . Peer-reviewed
License: CC BY NC
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Nucleic Acids Research
Article
License: CC BY NC
Data sources: UnpayWall
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PubMed Central
Article . 2009
License: CC BY NC
Data sources: PubMed Central
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DBLP
Article . 2021
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CentrosomeDB: a human centrosomal proteins database

Authors: Rubén Nogales-Cadenas; Federico Abascal; Javier Díez-Pérez; José María Carazo; Alberto D. Pascual-Montano;

CentrosomeDB: a human centrosomal proteins database

Abstract

Active research on the biology of the centrosome during the past decades has allowed the identification and characterization of many centrosomal proteins. Unfortunately, the accumulated data is still dispersed among heterogeneous sources of information. Here we present centrosome:db, which intends to compile and integrate relevant information related to the human centrosome. We have compiled a set of 383 likely human centrosomal genes and recorded the associated supporting evidences. Centrosome:db offers several perspectives to study the human centrosome including evolution, function and structure. The database contains information on the orthology relationships with other species, including fungi, nematodes, arthropods, urochordates and vertebrates. Predictions of the domain organization of centrosome:db proteins are graphically represented at different sections of the database, including sets of alternative protein isoforms, interacting proteins, groups of orthologs and the homologs identified with blast. Centrosome:db also contains information related to function, gene-disease associations, SNPs and the 3D structure of proteins. Apart from important differences in the coverage of the set of centrosomal genes, our database differentiates from other similar initiatives in the way information is treated and analyzed. Centrosome:db is publicly available at http://centrosome.dacya.ucm.es.

Keywords

Centrosome, Internet, Proteome, Domain organization, Articles, Human centrosome, Protein Structure, Tertiary, Centrosomal genes, Orthology relationships, Microtubule Proteins, Humans, Protein Isoforms, Centrosomal proteins, Databases, Protein

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selected citations
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This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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