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Synthesis and properties of small interfering RNA duplexes carrying 5-ethyluridine residues

Authors: Terrazas Martínez, Montserrat; Eritja i Casadellà, Ramon;

Synthesis and properties of small interfering RNA duplexes carrying 5-ethyluridine residues

Abstract

Oligoribonucleotides carrying 5-ethyluridine units were prepared using solid-phase phosphoramidite chemistry. The introduction of the tert-butyldimethylsilyl group at the 2'-OH position proceeded in good yield and very high 2'-regioselectivity. RNA duplexes carrying 5-ethyluridine either at the sense or the guide strands display RNAi activity comparable to or slightly better than that of unmodified RNA duplexes. Gene suppression experiments using luciferase targets in SH-SY5Y cells show that the ethyl group is generally well accepted at all positions although a small decrease in RNA interference activity is observed when one 5-ethylU residue is incorporated in the 3' overhangs.

Country
Spain
Keywords

Oligoribonucleotides, Oligonucleotides, Oligonucleòtids, Organic chemistry, 5-Ethyluridine, RNA interference, Dual luciferase assay, Solid-phase, Organophosphorus Compounds, Cell Line, Tumor, SiRNA, RNA, Humans, Oligonucleotide synthesis, RNA Interference, RNA, Small Interfering, Uracil, Química orgànica, Uridine

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
OpenAIRE UsageCountsViews provided by UsageCounts
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