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Synthesis and structural properties of oligonucleotides covalently linked to acridine and quindoline derivatives through a threoninol linker

Authors: A. Aviñó; S. Mazzini; R. Ferreira; R. Eritja;

Synthesis and structural properties of oligonucleotides covalently linked to acridine and quindoline derivatives through a threoninol linker

Abstract

Oligonucleotide conjugates containing acridine and quindoline derivatives linked through a threoninol molecule were synthesized. We showed that these conjugates formed duplexes and quadruplexes with higher thermal stability than the corresponding unmodified oligonucleotides. When acridine is located in the middle of the sequence, DNA duplexes have a similar stability independently of the natural base present in front of acridine. Self-complementary oligonucleotides and thrombin binding aptamers (TBA) carrying the acridine and quindoline molecules are studied by NMR.

Countries
Italy, Spain
Keywords

Models, Molecular, Indoles, Magnetic Resonance Spectroscopy, DNA duplex, Oligonucleotides, DNA-binding drugs, Quindoline, Thrombin binding aptamer, Nucleic Acid Denaturation, Quadruplex, Alkaloids, Threoninol, Acridine, Butylene Glycols, Circular Dichroism, DNA, Aptamers, Nucleotide, Amino Alcohols, NMR, oligonucleotide synthesis ; DNA duplex ; DNA-binding drugs ; DNA ; intercalating agents ; acridine ; quindoline ; threoninol ; quadruplex ; thrombin binding aptamer ; NMR, Intercalating agents, Quinolines, Acridines, Nucleic Acid Conformation, Oligonucleotide synthesis

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download
citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
OpenAIRE UsageCountsViews provided by UsageCounts
downloads
OpenAIRE UsageCountsDownloads provided by UsageCounts
16
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42
72
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