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Cell
Article . 2024 . Peer-reviewed
License: CC BY NC ND
Data sources: Crossref
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DIGITAL.CSIC
Article . 2024 . Peer-reviewed
Data sources: DIGITAL.CSIC
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Global epistasis and the emergence of function in microbial consortia

Authors: Juan Diaz-Colunga; Abigail Skwara; Jean C.C. Vila; Djordje Bajic; Alvaro Sanchez;

Global epistasis and the emergence of function in microbial consortia

Abstract

The many functions of microbial communities emerge from a complex web of interactions between organisms and their environment. This poses a significant obstacle to engineering microbial consortia, hindering our ability to harness the potential of microorganisms for biotechnological applications. In this study, we demonstrate that the collective effect of ecological interactions between microbes in a community can be captured by simple statistical models that predict how adding a new species to a community will affect its function. These predictive models mirror the patterns of global epistasis reported in genetics, and they can be quantitatively interpreted in terms of pairwise interactions between community members. Our results illuminate an unexplored path to quantitatively predicting the function of microbial consortia from their composition, paving the way to optimizing desirable community properties and bringing the tasks of predicting biological function at the genetic, organismal, and ecological scales under the same quantitative formalism.

Countries
Spain, Netherlands
Keywords

Global epistasis, quantitative genetics, synthetic microbial communities, Quantitative genetics, global epistasis, Microbial Consortia, systems biology, Epistasis, Genetic, Bioengineering, community-function landscape, Community-function landscape, microbial interactions, Microbial consortia, Microbial interactions, Environmental Microbiology, microbial consortia, Microbial community function, Synthetic microbial communities, Microbial Interactions, microbial community function, Synthetic Biology, Synthetic microbial communities;, Systems biology

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
OpenAIRE UsageCountsViews provided by UsageCounts
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37
Top 10%
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Top 1%
43
32
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