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Journal of Virological Methods
Article . 2008 . Peer-reviewed
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Novel gel-based and real-time PCR assays for the improved detection of African horse sickness virus

Authors: Rodriguez-Sanchez, Belen; Fernandez-Pinero, Jovita; Sailleau, Corinne; Zientara, Stéphan; Belák, Sándor; Arias, Marisa; Sanchez-Vizcaino, José Manuel;

Novel gel-based and real-time PCR assays for the improved detection of African horse sickness virus

Abstract

In order to improve, ensure and accelerate the diagnosis of African horse sickness, a highly devastating, transboundary animal disease listed by the World Animal Health Organisation, (OIE) three novel diagnostic PCR assays were developed and tested in this study. The reverse transcription-PCR (RT-PCR) tests were the following: (a) a conventional, gel-based RT-PCR, (b) a real-time PCR with SYBR-Green-named rRT-PCR SYBR-Green-, and (c) a real-time PCR rRT-PCR with TaqMan probe (termed rRT-PCR TaqMan). The same pair of primers-directed against African Horse Sickness Virus (AHSV) segment 5, encoding the non-structural protein NS1, is used in the three tests listed above. The three PCR assays detected similarly the nine AHSV serotypes from cultivated viral suspensions of different origins. The RT-PCR assays provided high sensitivity ranging from 0.1 to 1.2TCID(50)/ml. The specificity was also high, considering that related viruses, such as Bluetongue virus, and other equine viruses, such as West Nile Virus, remained negative for RT-PCR amplification. The detection of AHSV virus can be completed within 2-3h. These results indicate that the novel PCR methods described in this paper provide robust and versatile tools that allow rapid and highly specific, simultaneous detection of all AHSV serotypes.

Countries
Spain, France
Keywords

TaqMan, Diamines, Viral Nonstructural Proteins, Polymerase Chain Reaction, Sensitivity and Specificity, 630, REAL-TIME RT-PCR, Serotype, Non-structural protein NS1, African Horse Sickness, Chlorocebus aethiops, TAQMAN, African Horse Sickness Virus, Animals, Taq Polymerase, Benzothiazoles, Horses, Organic Chemicals, Serotyping, AFRICAN HORSE SICKNESS, Vero Cells, SYBR-Green, DNA Primers, [SDV.MP.VIR] Life Sciences [q-bio]/Microbiology and Parasitology/Virology, Electrophoresis, Agar Gel, Reverse Transcriptase Polymerase Chain Reaction, SYBR-GREEN, Real-time RT-PCR, [SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/Virology, DNA, Viral, Quinolines, NON-STRUCTURAL PROTEIN NS1, African horse sickness, SEROTYPE

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selected citations
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This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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