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A putative topoisomerase II gene of African swine fever virus was mapped using a degenerate oligonucleotide probe derived from a region highly conserved in type II topoisomerases. The gene is located within EcoRI fragments P and H of the African swine fever virus genome. Sequencing of this region has revealed a long open reading frame, designated P1192R, encoding a protein of 1192 amino acids, with a predicted molecular weight of 135,543. Open reading frame P1192R is transcribed late after infection into a 4.6-kb RNA. The deduced amino acid sequence of this open reading frame shares significant similarity with topoisomerase II sequences from different sources, with percentages of identity between 23 and 29%. The evolutionary relationships among the topoisomerase II sequences of ASF virus, eukaryotes and prokaryotes were analyzed and a phylogenetic tree was established. The tree indicates that the ASF virus topoisomerase II gene was present in the virus genome before protozoa, yeasts, and metazoa diverged.
Viral Structural Proteins, Base Sequence, Genes, Viral, Molecular Sequence Data, Restriction Mapping, Gene Expression, African Swine Fever Virus, Biological Evolution, DNA Topoisomerases, Type II, Oligodeoxyribonucleotides, DNA, Viral, Animals, Amino Acid Sequence, RNA, Messenger, Sequence Alignment, Vero Cells
Viral Structural Proteins, Base Sequence, Genes, Viral, Molecular Sequence Data, Restriction Mapping, Gene Expression, African Swine Fever Virus, Biological Evolution, DNA Topoisomerases, Type II, Oligodeoxyribonucleotides, DNA, Viral, Animals, Amino Acid Sequence, RNA, Messenger, Sequence Alignment, Vero Cells
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