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DIGITAL.CSIC
Article . 2010 . Peer-reviewed
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Validación estadística de la presencia en plantas de quimiotipos caracterizados por la concentración de componentes volátiles obtenida mediante GC-MS

Authors: Sanz, Jesús; Morales, Ramón; Soria, Ana Cristina; Esteban, Joaquín; Martín-álvarez, Pedro J.;

Validación estadística de la presencia en plantas de quimiotipos caracterizados por la concentración de componentes volátiles obtenida mediante GC-MS

Abstract

Se denomina “quimiotipo” a un grupo de individuos de una especie que se distingue de forma significativa del resto por su composición química. Mientras que la existencia de polimorfismo químico es bien conocida para diversas especies, el significado estadístico de la diferencia entre sus composiciones no ha recibido suficiente atención. Se propone, para la asignación de un nivel de significado a la existencia de un quimiotipo caracterizado por un compuesto, un método basado en la formación de agrupaciones mediante el procedimiento de k-medias, el cálculo de la distancia de Mahalanobis Dmah como estimación de la separación entre grupos, y la comparación de este valor con valores Dmah calculados a partir de datos simulados con una distribución normal. El método se aplica a los datos de concentración obtenidos por GC-MS de compuestos volátiles de muestras de Thymus zygis subsp. zygis, Thymus zygis subsp. sylvestris y Lavandula luisieri.

The name “chemotypes” indicates a group of individuals of a species which can be significantly distinguished from the rest from their chemical composition. Whereas the chemical polymorphism of several species is well known, the statistical significance of their differences in composition has been scarcely studied. The application of the k-means algorithm as a clustering technique, of the Mahalanobis distance Dmah as a measure of group separation and its comparison with Dmah values calculated from simulated data having a normal distribution, is proposed in order to assign a significance level to a single compound chemotype. The method is applied to volatile concentration data from samples of Thymus zygis subsp. zygis, Thymus zygis subsp. sylvestris and Lavandula luisieri.

Comunidad de Madrid (Programa ANALISYC, S505/AGR-0312).

Peer reviewed

Country
Spain
Keywords

570, Thymus zygis subsp. zygis, Lavandula luisieri, Distancia de Mahalanobis, Chemotypes, Componentes volátiles, Botánica, componentes volátiles, Quimiotipos, Sylvestris, Volatile components, Thymus zygis Subs, Thymus zygis subsp. sylvestris, Thymus zygis subsp, distancia de Mahalanobis, Zygis, K-medias, Mahalanobis distance, K-means, quimiotipos, k-medias, Lavandula luisieri.

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selected citations
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This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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