Powered by OpenAIRE graph
Found an issue? Give us feedback
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Recolector de Cienci...arrow_drop_down
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
Computers & Geosciences
Article . 2020 . Peer-reviewed
License: Elsevier TDM
Data sources: Crossref
DBLP
Article . 2020
Data sources: DBLP
versions View all 3 versions
addClaim

Applied ichnology in sedimentary geology: Python scripts as a method to automatize ichnofabric analysis in marine core images

Authors: Santiago Casanova-Arenillas; Francisco J. Rodríguez-Tovar; Francisca Martínez-Ruiz;

Applied ichnology in sedimentary geology: Python scripts as a method to automatize ichnofabric analysis in marine core images

Abstract

Image analysis has been succesfully applied in core research, especially in studies from modern deposits, to enhance the visibility of ichnological features and characterize ichnoassemblages and ichnofabrics. Its application to ichnological research provides useful information for marine core studies, hence sedimentary geology, but also for hydrocarbon exploration. Here we develop a new methodology, using Python programming language, which significantly improve the ichnological analysis. The method automatizes the process of obtaining continuous ichnological information, in this case about the percentage of bioturbation as a key aspect of the ichnofabric approach. The method affords the possibility of automatically generating continuous percentage and other index records using pixel counts in previously treated images. The resulting data sets are easy to correlate with the information usually obtained from cores (e.g., geochemical and mineralogical data). Such an integration of different proxies for to the field of sedimentary geology especially in the use of ichnological analysis, making it easier for the researcher, less time consuming, and more likely to be undertaken. The coding and sharing of open software tools allow for great flexibility, giving researchers in ichnology or related fields the option to implement new features, develop more complex tools to improve the package, and share findings with the scientific community.

This study was funded by project CGL2015-66835-P (Secretaría de Estado de I+D+I, Spain), Research Group RNM-178 (Junta de Andalucía), and Scientific Excellence Unit UCE-2016-05 (Universidad de Granada). The work of Santiago Casanova is funded through a pre-doctoral grant from the Ministerio de Educación, Cultura y Deporte (Government of Spain). The research was conducted in the framework of the “Ichnology and Palaeoenvironment Research Group” (UGR).

Keywords

Palaeoenvironment, Ichnology, Image analysis, Python

  • BIP!
    Impact byBIP!
    selected citations
    These citations are derived from selected sources.
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    17
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Top 10%
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Average
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Top 10%
    OpenAIRE UsageCounts
    Usage byUsageCounts
    visibility views 77
    download downloads 43
  • 77
    views
    43
    downloads
    Powered byOpenAIRE UsageCounts
Powered by OpenAIRE graph
Found an issue? Give us feedback
visibility
download
selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
OpenAIRE UsageCountsViews provided by UsageCounts
downloads
OpenAIRE UsageCountsDownloads provided by UsageCounts
17
Top 10%
Average
Top 10%
77
43
Green