Powered by OpenAIRE graph
Found an issue? Give us feedback
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Recolector de Cienci...arrow_drop_down
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
versions View all 1 versions
addClaim

Transcriptomic changes associated with fruit quality and crop productivity in common bean

Authors: Gómez-Martín, Cristina; Santalla Ferradás, Marta; Lozano, Rafael; González Fernández, Ana María; Lebrón, C. R.; Hackenberg, M.; Oliver, J. L.;

Transcriptomic changes associated with fruit quality and crop productivity in common bean

Abstract

Fruit quality and crop productivity in legume species are critically influenced by maturation and dehiscence developmental processes (Tang et al., 2013). These stages of fruit development are well characterized in the Arabidopsis plant model but not in legumes, as is the case of common bean Phaseolus vulgaris (Li and Olsen, 2016). Here, we used RNA¿seq to compare immature and mature stages of pod development in two accessions (PMB0225 and PHA1037) of this species, which also differ in other important agronomical traits such as dehiscence and fiber content. The most recent update of the Phaseolus vulgaris reference genome was used for the alignment of RNA¿seq short reads, then computing fold changes among the different developmental stages. In this way, we were able to derive a list of differentially expressed genes (DEG) that are associated with pod maturation in both accessions, mainly involved in transmembrane transporter activity, carbohydrate metabolism and photosynthesis. Furthermore, among DEGs between dehiscent and indehiscent fruits we found genes related to oxidation¿reduction and lipid metabolic processes.

This work was financially supported by the Ministerio de Economía y Competitividad (AGL 2014-51809-R, AGL2015-64991-C3-1-R, AGL2017-88702-C2-2-R, AGL2017-88174-R) and UE-FEDER Program.

Resumen del póster presentado en Granada, entre el 14 y el 16 de noviembre de 2018.

Peer reviewed

  • BIP!
    Impact byBIP!
    selected citations
    These citations are derived from selected sources.
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    0
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Average
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Average
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Average
Powered by OpenAIRE graph
Found an issue? Give us feedback
selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average
Green