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Molecular Biology and Evolution
Article . 2011 . Peer-reviewed
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Network-Level and Population Genetics Analysis of the Insulin/TOR Signal Transduction Pathway Across Human Populations

Authors: Luisi, Pierre, 1985-; Alvarez-Ponce, David; Dall'Olio, Giovanni Marco, 1983-; Sikora, Martin, 1976-; Bertranpetit, Jaume, 1952-; Laayouni, Hafid, 1968-;

Network-Level and Population Genetics Analysis of the Insulin/TOR Signal Transduction Pathway Across Human Populations

Abstract

Genes and proteins rarely act in isolation, but they rather operate as components of complex networks of interacting molecules. Therefore, for understanding their evolution, it may be helpful to take into account the interaction networks in which they participate. It has been shown that selective constraints acting on genes depend on the position that they occupy in the network. Less understood is how the impact of local adaptation at the intraspecific level is affected by the network structure. Here, we analyzed the patterns of molecular evolution of 67 genes involved in the insulin/target of rapamycin (TOR) signal transduction pathway. This well-characterized pathway plays a key role in fundamental processes such as energetic metabolism, growth, reproduction, and aging and is involved in metabolic disorders such as obesity, insulin resistance, and diabetes. For that purpose, we combined genotype data from worldwide human populations with current knowledge of the structure and function of the pathway. We identified the footprint of recent positive selection in nine of the studied genomic regions. Most of the adaptation signals were observed among Middle East and North African, European, and Central South Asian populations. We found that positive selection preferentially targets the most central elements in the pathway, in contrast to previous observations in the whole human interactome. This observation indicates that the impact of positive selection on genes involved in the insulin/TOR pathway is affected by the pathway structure.

Country
Spain
Keywords

Network evolution, Insulin/TOR signal transduction pathway, TOR Serine-Threonine Kinases, Racial Groups, Polymorphism, Single Nucleotide, Positive selection, Genetics, Population, Human populations, Humans, Insulin, Selection, Genetic, Signal Transduction

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
OpenAIRE UsageCountsViews provided by UsageCounts
downloads
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23
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