Aerosol deposition in the respiratory airways has traditionally been examined in terms of the Stokes number based on the reference flow timescale. This choice leads to large scatter in deposition efficiency when plotted against the reference Stokes number because the velocity and length scales experienced by advected particles deviate considerably from the reference values. A time-average of the particle local Stokes number should be adopted instead. Our results demonstrate that this average, or effective, Stokes number can deviate significantly from the reference value, in particular in the intermediate Stokes number range where variation across subjects is largest.