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Conference object . 2021
License: CC BY
Full-Text: https://strathprints.strath.ac.uk/76079/1/Hobbs_etal_MSAC_2021_cazy_webscraper_For_creating_a_local_CAZy_database.pdf
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Conference object . 2021
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cazy_webscraper : For creating a local CAZy database

descriptionPublicationkeyboard_double_arrow_right Conference object 04 Apr 2021 United Kingdom English
Authors: Hobbs, Emma; Gloster, Tracey; Chapman, Sean; Pritchard, Leighton;

handle: 10023/24613

cazy_webscraper : For creating a local CAZy database

Abstract

Carbohydrate Active enZymes (CAZymes) are pivotal in pathogen recognition, signalling, structure and energy metabolism. CAZy (www.cazy.org) is the most comprehensive CAZyme database, but it does not provide methods for automating data retrieval or submitting sequences for annotation. cazy_webscraper retrieves user-specified datasets from CAZy, producing a local SQL database enabling thorough interrogation of the data. cazy_webscraper can also retrieve protein sequences from GenBank and download structure files from RCSB PDB.

Non peer reviewed

Country
United Kingdom
Related Organizations
Keywords

ZA4450 Databases, CAZy, Webscraper, QR Microbiology, ZA4450, CAZymes, QR

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average
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