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Research in Plant Disease
Article . 2012 . Peer-reviewed
Data sources: Crossref
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Research in Plant Disease
Article
License: CC BY NC
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A Duplex PCR for Detection of Phytophthora katsurae Causing Chestnut Ink Disease

밤나무 잉크병균, Phytophthora katsurae의 검출을 위한 Duplex PCR
Authors: Dong-Hyeon Lee; Sun-Keun Lee; Hye-Jeong Kim; Sang-Hyun Lee; Sang-Yong Lee; Jong-Kyu Lee;

A Duplex PCR for Detection of Phytophthora katsurae Causing Chestnut Ink Disease

Abstract

Phytophthora katsurae is a fungal pathogen responsible for chestnut ink disease. We designed two duplex primer sets (SOPC 1F/1R+KatI 3F/5R, SOPC 1-1F/1-1R+KatI 3F/5R) to detect P. katsurae. SOPC 1F/1R and SOPC 1-1F/1-1R primer pairs were designed for sequence characteristic amplification regions (SCAR) marker, and KatI 3F/5R primer pair was used for P. katsurae-specific primer designed from internal transcribed spacer (ITS) region. To assess the sensitivity of duplex PCR, genomic DNA was serially diluted 10-fold to make the final concentrations from 1 mg/ml to 1 ng/ml. The sensitivity for two primer sets were 1 µg/ml and 100 ng/ml, respectively. To find detection limits for zoospores of P. katsurae, each zoospore suspension was serially diluted 10-fold to make the final concentrations from 1× 10 to 1× 10 cells/ml, and then DNA was extracted. The limits of detection for all of two primer sets were 1× 10 cells/ml. All of two primer sets were specific to P. katsurae in PCR detection and did not produce any P. katsurae-specific PCR amplicons from other 16 Phytophthora species used as the control. This study shows that duplex PCR using two primer sets might be a useful tool for rapid and efficient detection of P. katsurae.

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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