Cone beam computed tomography (CBCT) is an important source of three‐dimensional volumetric data in clinical orthodontics. Due to the progress in the technology of CBCT, for orthodontic clinical diagnosis, treatment and follow‐up, it supply much more reliable information compared to conventional radiography. But it carries both risks and benefits in orthodontics and the principal risks and limitations include ionizing radiation, the presence of artifacts, higher cost, limited accessibility, and the need for additional training. However, this imaging modality has several recognized indications in orthodontics, such as the assessment of impacted and ectopic teeth, assessment of pharyngeal airway, assessment of mini-implant sites, evaluation of craniofacial abnormalities, evaluation of sinus anatomy or pathology, evaluation of root resorption, evaluation of the cortical bone plate, and orthognathic surgery planning and evaluation. CBCT is particularly justified when it brings a benefit to the patient or changes the outcome of the treatment when compared with conventional imaging techniques.