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Genetic diversity of Mycosphaerella fijiensis in Brazil analyzed using an ERIC-PCR marker

descriptionPublicationkeyboard_double_arrow_right Article 01 Jan 2014 Brazil Publisher:Genetics and Molecular ResearchJournal:Genetics and Molecular Research, volume 13, pages 7,698-7,707 (eissn: 1676-5680, Copyright policy )
Authors: Silva, G. F.; Paixão, R. D.V.; Queiroz, Casley B.; Santana, Mateus Ferreira; Souza, A. S.; Sousa, Nelcimar Reis; Hanada, Rogério Eiji; +1 Authors

doi: 10.4238/2014.september.26.7

pmid: 25299083

Genetic diversity of Mycosphaerella fijiensis in Brazil analyzed using an ERIC-PCR marker

Abstract

The Enterobacterial repetitive intergenic consensus (ERIC) marker was used to analyze the genetic variability of Mycosphaerella fijiensis, the causative agent of Black Sigatoka disease in banana plants. A total of 123 isolates were used, which were divided into populations based on their original hosts and collection sites in Brazil. A total of 9 loci were amplified, 77.8% of which were found to be polymorphic. The genetic diversity found in the population was 0.20. Analysis of molecular variance (AMOVA) demonstrated that the highest level of genetic variation is within populations. Cluster analysis revealed three main groups in Brazil, with no correlation between geographic and genetic distance.

Country
Brazil
Related Organizations
Keywords

Genetic Markers, Dna Primers, Species Difference, Procedures, Polymerase Chain Reaction, Mycosphaerella Fijiensis, Genetic, Ascomycota, Species Specificity, Dna Extraction, Genetic Marker, Haplotype, Genetics, Cluster Analysis, Microsatellite Marker, Pseudocercospora, Polymorphism, Photosynthesis, Transposon, DNA Primers, Base Sequence, Brasil, Correlation Analysis, Mycosphaerella, Nucleotide Sequence, Genetic Analysis, Musa, Primer Dna, Single Nucleotide, Fungus Isolation, Classification, Ascomycetes, Enterobacterial Repetitive Intergenic Consensus Polymerase Chain Reaction Marker, Gene Locus, Restriction Fragment Length, Genetic Variability, Brazil

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    popularity
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    influence
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
6
Average
Average
Average
Green
gold