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International Journal of Molecular Sciences
Article . 2021 . Peer-reviewed
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Article . 2021
Data sources: PubMed Central
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Evolution of A bHLH Interaction Motif

Authors: Peter S. Millard; Birthe B. Kragelund; Meike Burow;

Evolution of A bHLH Interaction Motif

Abstract

Intrinsically disordered proteins and regions with their associated short linear motifs play key roles in transcriptional regulation. The disordered MYC-interaction motif (MIM) mediates interactions between MYC and MYB transcription factors in Arabidopsis thaliana that are critical for constitutive and induced glucosinolate (GLS) biosynthesis. GLSs comprise a class of plant defense compounds that evolved in the ancestor of the Brassicales order. We used a diverse set of search strategies to discover additional occurrences of the MIM in other proteins and in other organisms and evaluate the findings by means of structural predictions, interaction assays, and biophysical experiments. Our search revealed numerous MIM instances spread throughout the angiosperm lineage. Experiments verify that several of the newly discovered MIM-containing proteins interact with MYC TFs. Only hits found within the same transcription factor family and having similar characteristics could be validated, indicating that structural predictions and sequence similarity are good indicators of whether the presence of a MIM mediates interaction. The experimentally validated MIMs are found in organisms outside the Brassicales order, showing that MIM function is broader than regulating GLS biosynthesis.

Country
Denmark
Keywords

jasmonate signaling, Basic Helix-Loop-Helix Proteins, Arabidopsis Proteins, Glucosinolates, Helix-Loop-Helix Motifs, Arabidopsis, MYB, MYC, Article, Intrinsically Disordered Proteins, bHLH, Gene Expression Regulation, Plant, short linear motif (SLiM), intrinsically disordered protein (IDP), plant defense metabolism, protein interaction, Amino Acid Sequence, transcription factor, interaction motif, Transcription Factors

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
7
Top 10%
Average
Top 10%
Green
gold