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Transcriptome analysis of Phoenix canariensis Chabaud in response to Rhynchophorus ferrugineus Olivier attacks

Authors: Giovino, A; Bertolini, E; Fileccia, Veronica; Al Hassan, M; Labra, M; MARTINELLI, Federico;

Transcriptome analysis of Phoenix canariensis Chabaud in response to Rhynchophorus ferrugineus Olivier attacks

Abstract

Red Palm Weevil (RPW, Rhynchophorus ferrugineus Olivier) threatens most palm species worldwide. Until now, no studies have analyzed the gene regulatory networks of Phoenix canariensis (Chabaud) in response to RPW attacks. The aim of this study was to fill this knowledge gap. Providing this basic knowledge is very important to improve its management.A deep transcriptome analysis was performed on fully expanded leaves of healthy non-infested trees and attacked trees at two symptom stages (middle and late infestation). A total of 54 genes were significantly regulated during middle stage. Pathway enrichment analysis showed that phenylpropanoid-related pathways were induced at this stage. More than 3300 genes were affected during late stage of attacks. Higher transcript abundances were observed for lipid fatty acid metabolism (fatty acid and glycerolipids), tryptophan metabolism, phenylpropanoid metabolism. Key RPW-modulated genes involved in innate response mediated by hormone crosstalk were observed belonging to auxin, jasmonate and salicylic acid (SA) pathways. Among transcription factors, some WRKYs were clearly induced. qRT-PCR validation confirmed the upregulation of key genes chosen as validation of transcriptomic analysis.A subset of these genes may be further analyzed in future studies to confirm their specificity to be induced by RPW infestations.

Country
Italy
Keywords

Genes; Palm; Phoenix canariensis; Red palm weevil; Rhynchophorus ferrugineus; RNA-seq; Plant Science, Plant culture, Plant Science, PALM, Red palm weevil, Rhynchophorus ferrugineus, SB1-1110, Genes, Genes; Palm; Phoenix canariensis; Red palm weevil; Rhynchophorus ferrugineus; RNA-seq;, Phoenix canariensis, Red Palm Weevil, RNA-Seq, RNA-seq, genes; palm; Phoenixcanariensis; RedPalmWeevil; Rhynchophorusferrugineus; RNA-seq, genes, palm

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selected citations
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This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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