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Frontiers in Bioscience
Article . 2012 . Peer-reviewed
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Substrate channeling in proline metabolism

Authors: Arentson, Benjamin W; Sanyal, Nikhilesh; Becker, Donald F.;

Substrate channeling in proline metabolism

Abstract

Proline metabolism is an important pathway that has relevance in several cellular functions such as redox balance, apoptosis, and cell survival. Results from different groups have indicated that substrate channeling of proline metabolic intermediates may be a critical mechanism. One intermediate is pyrroline-5-carboxylate (P5C), which upon hydrolysis opens to glutamic semialdehyde (GSA). Recent structural and kinetic evidence indicate substrate channeling of P5C/GSA occurs in the proline catabolic pathway between the proline dehydrogenase and P5C dehydrogenase active sites of bifunctional proline utilization A (PutA). Substrate channeling in PutA is proposed to facilitate the hydrolysis of P5C to GSA which is unfavorable at physiological pH. The second intermediate, gamma-glutamyl phosphate, is part of the proline biosynthetic pathway and is extremely labile. Substrate channeling of gamma-glutamyl phosphate is thought to be necessary to protect it from bulk solvent. Because of the unfavorable equilibrium of P5C/GSA and the reactivity of gamma-glutamyl phosphate, substrate channeling likely improves the efficiency of proline metabolism. Here, we outline general strategies for testing substrate channeling and review the evidence for channeling in proline metabolism.

Country
United States
Keywords

Models, Molecular, 570, Proline, Biophysics, GSA, Review, Proline Metabolism, Biochemistry, Models, Biological, Substrate Specificity, PRODH, Other Biochemistry, Bacterial Proteins, Proline Oxidase, Glutamic semialdehyde, Pyrroline-5- carboxylate Dehydrogenase, Gamma-Glutamyl Phosphate Reductase, Life Sciences, Membrane Proteins, P5CS, Pyrroline-5- Carboxylate Synthase, Gamma-Glutamyl Kinase, P5C, 1-Pyrroline-5-Carboxylate Dehydrogenase, Pyrroline-5-Carboxylate, P5CDH, Gamma-Glutamyl Phosphate, and Structural Biology, Proline Dehydrogenase, Substrate Channeling, Metabolic Networks and Pathways, Biotechnology

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
59
Top 10%
Top 10%
Top 10%
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