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https://dx.doi.org/10.25673/86...
Doctoral thesis . 2013
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Selection of an artificial binding protein against the ectodomain of PTH1R

Authors: Zhang, Qi;

Selection of an artificial binding protein against the ectodomain of PTH1R

Abstract

In der vorliegenden Arbeit wurde eine naїve scaffold Bibliothek, basierend auf dem humanen γB-Kristallin (hγBC), gegen die N-terminale, extrazelluläre Domäne des Parathyroidhormon-1-Rezeptors (nPTH1R), einem Vertreter der Klasse B GPCRs, selektiert. Vier Selektionsrunden (biopanning) wurden durchgeführt, wobei eine Variante (2G4) wiederholt isoliert werden konnte. Der Rezeptor wird von ihr in einer 1:1 Stöchiometrie mit niedrig mikromolarer Affinität gebunden. Zwei Phenylalanine an den Randomizierungspositionen 2 und 17 scheinen den größten Anteil am Bindungsereigniss zu haben, zumal die restlichen 7 umliegenden Aminosäuren ebenfalls ihren Teil zur Interaktion der beiden Moleküle beitragen. Eine Kompetition der Bindung von PTH an nPTH1R durch 2G4 und umgekehrt konnte nicht nachgewiesen werden, was auf unterschiedliche Epitope beider nPTH1R-Interaktionspartner schließen lässt. Potentielle Anwendungen für diesen vielversprechenden Binder könnten zum einen in Ko-Kristallisationsexperimenten, oder aber auch in der Affinitätschromatographie zur verbesserten Homogenität des Rezeptors aus Zellextraktionen liegen.

In this thesis, a naive scaffold library, based on human γB crystallin (hγBC), was selected against the N-terminal extracellular domain of parathyroid hormone 1 receptor (nPTH1R), a class B GPCR. Four rounds of a biopanning process were performed and one hγBC binding variant, called 2G4, was repeatedly isolated. It binds the nPTH1R with low micromolar affinity in a 1:1 stochiometry. Two phenylalanines on randomization positions 2 and 17 were found to contribute the most to the binding interaction and the surrounding seven residues also participate in the binding event. There is no competition binding of 2G4 and PTH to nPTH1R via identical or overlapping binding sites. This promising binder could have several potential applications, such as in co-crystallization experiments or in affinity chromatography to increase the homogeneity of the receptor.

Country
Germany
Keywords

ddc:610, 570, 572, ddc:572, Hochschulschrift, 610, ddc:570, Online-Publikation

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average
Green