The potential of multilocus electrophoretic studies for providing insight into the population biology of parasitic organisms was studied using the swine parasite Ascaris suum suum. Thirty-eight loci encoding enzymatic or nonenzymatic proteins have been resolved in extracts of adult worms by starch-gel electrophoresis. A preliminary study of variation in Ascaris from eastern Iowa revealed an average heterozygosity of 6.6%. Allele frequencies at six polymorphic loci were similar in males and females and genotypic frequencies were in accord with those expected in a single, randomly mating population; however, the significant linkage disequilibrium between Pep-2 and Es-3 suggested that there may be some genetic substructuring within Ascaris from Iowa. Genetic comparisons of Ascaris from Iowa with Ascaris from New Jersey and Maryland indicated slight differences between eastern and midwestern populations, as well as between the east coast localities. Larger samples from more locations are needed before any statistical significance can be attached to these differences; however, qualitative comparisons suggest that the differentiation is a biological reality. Knowledge of the population biology of this and other parasites may contribute to planning effective control programs.