Powered by OpenAIRE graph
Found an issue? Give us feedback
addClaim

Self-Capping RNA Catalysts Derived From Selection-Amplification

Authors: F, Huang; Z, Yang; M, Yarus;

Self-Capping RNA Catalysts Derived From Selection-Amplification

Abstract

The reactions of nucleoside 5’ triphosphates are among the most widespread (and therefore ancient) of the reactions of modern biochemistry. To study RNA enzymes that catalyze an important class of such reactions, we devised a new selection for RNAs that labilize their /3-y phosphates. We select RNAs that circularize in the presence of T4 RNA ligase, a reaction that requires a free 5’ a-phosphate and therefore indicates release of the /3r phosphates present in every transcript. Unexpectedly, free phosphates were found to react readily at the a-phosphate of such RNAs. This was emphasized by further selection for RNAs that self-link to the free triphosphate of UTP-agarose. The most prevalent ribozyme (40% of the final, doubly-selected pool) has been characterized. The uniform product of all such reactions is released pyrophosphate, and the RNA product has the attacking phosphate linked to the 5’ a-phosphate of the catalytic RNA. Thus, reaction with free GDP yields pyrophosphate plus a congener of the eukaryotic message cap (1): ppG + ppp(5’)GRNA ~ ppi + G(5’)ppp(5’)GRNA

Related Organizations
Keywords

Ligases, RNA Caps, RNA, RNA, Catalytic, Catalysis

  • BIP!
    Impact byBIP!
    selected citations
    These citations are derived from selected sources.
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    2
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Average
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Average
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Average
Powered by OpenAIRE graph
Found an issue? Give us feedback
selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
2
Average
Average
Average
Upload OA version
Are you the author of this publication? Upload your Open Access version to Zenodo!
It’s fast and easy, just two clicks!