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Standardized Antimicrobial Resistance Surveillance in Somaliland: A Hospital-Based Baseline Evaluation Using CLSI M39 and WHONET

Authors: Nouh Botan; Abdisamad SH O ALI; Hamse warsame; Zainab ALI;

Standardized Antimicrobial Resistance Surveillance in Somaliland: A Hospital-Based Baseline Evaluation Using CLSI M39 and WHONET

Abstract

AbstractBackground: Antimicrobial resistance (AMR) surveillance remains limited across the Horn of Africa because of constrained laboratory infrastructure and fragmented microbiological reporting systems. This study established the first hospital-based cumulative antibiogram in Somaliland using Clinical and Laboratory Standards Institute (CLSI) M39-A4 methodology and WHONET software to provide a baseline surveillance model for resource-limited healthcare settings.Methods: A retrospective surveillance study was conducted using microbiology records collected over a 12-month period (January–December 2025) at a tertiary referral hospital in Somaliland. Duplicate isolates were removed according to CLSI M39-A4 recommendations by including only the first isolate per patient per species. Intermediate susceptibility results were categorized as resistant. Subgroup comparisons by specimen source were evaluated using Fisher’s exact test.Results: From 1,787 validated laboratory records, 277 unique bacterial isolates were analyzed. Escherichia coli was the predominant pathogen (50.9%, n=141), followed by Staphylococcus aureus (33.6%, n=93). Nitrofurantoin demonstrated the highest susceptibility rate (78.5%), followed by gentamicin (60.4%). Low susceptibility rates were observed for ampicillin (7.3%), ciprofloxacin (19.0%), and meropenem (30.5%). Wound/pus E. coli isolates demonstrated lower meropenem susceptibility than urinary isolates (13.3% vs. 35.4%), although subgroup differences were not statistically significant (p>0.05).Conclusion: This study establishes the first standardized cumulative antibiogram generated in Somaliland using CLSI M39-A4 and WHONET methodology. The findings highlight the need to strengthen antimicrobial stewardship, microbiological diagnostics, and structured AMR surveillance systems in resource-limited healthcare settings.

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average
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