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Biomedical Signal Processing and Control
Article . 2025 . Peer-reviewed
License: Elsevier TDM
Data sources: Crossref
https://doi.org/10.2139/ssrn.4...
Article . 2024 . Peer-reviewed
Data sources: Crossref
https://dx.doi.org/10.48550/ar...
Article . 2023
License: arXiv Non-Exclusive Distribution
Data sources: Datacite
DBLP
Article . 2023
Data sources: DBLP
DBLP
Article . 2025
Data sources: DBLP
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Sam-Octa: Prompting Segment-Anything for Octa Image Segmentation

Authors: Xinrun Chen; Chengliang Wang 0002; Haojian Ning; Shiying Li; Mei Shen;

Sam-Octa: Prompting Segment-Anything for Octa Image Segmentation

Abstract

Segmenting specific targets or biomarkers is necessary to analyze optical coherence tomography angiography (OCTA) images. Previous methods typically segment all the targets in an OCTA sample, such as retinal vessels (RVs). Although these methods perform well in accuracy and precision, OCTA analyses often focusing local information within the images which has not been fulfilled. In this paper, we propose a method called SAM-OCTA for local segmentation in OCTA images. The method fine-tunes a pre-trained segment anything model (SAM) using low-rank adaptation (LoRA) and utilizes prompt points for local RVs, arteries, and veins segmentation in OCTA. To explore the effect and mechanism of prompt points, we set up global and local segmentation modes with two prompt point generation strategies, namely random selection and special annotation. Considering practical usage, we conducted extended experiments with different model scales and analyzed the model performance before and after fine-tuning besides the general segmentation task. From comprehensive experimental results with the OCTA-500 dataset, our SAM-OCTA method has achieved state-of-the-art performance in common OCTA segmentation tasks related to RV and FAZ, and it also performs accurate segmentation of artery-vein and local vessels. The code is available at https://github.com/ShellRedia/SAM-OCTA-extend.

arXiv admin note: text overlap with arXiv:2309.11758

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Keywords

FOS: Computer and information sciences, Computer Science - Machine Learning, Machine Learning (cs.LG)

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
6
Top 10%
Average
Top 10%
Green