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The Journal of Bone and Joint Surgery (American)
Article . 2020 . Peer-reviewed
License: CC BY NC ND
Data sources: Crossref
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The Journal of Bone and Joint Surgery (American)
Article
License: CC BY NC ND
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PPARGC1B Is Associated with Nontraumatic Osteonecrosis of the Femoral Head

A Genomewide Association Study on a Chart-Reviewed Cohort
Authors: Yanfei Zhang; Thomas R. Bowen; Steven A. Lietman; Michael Suk; Marc S. Williams; Ming Ta Michael Lee;

PPARGC1B Is Associated with Nontraumatic Osteonecrosis of the Femoral Head

Abstract

Background:Previous studies have demonstrated the influence of heritable factors on the development of nontraumatic osteonecrosis of the femoral head (ONFH). We hypothesized that genetic variation is associated with an increased risk of ONFH, and that variants could be identified by a genomewide association study (GWAS).Methods:Using data collected from the MyCode Community Health Initiative, we identified 118 adult patients with radiographically confirmed nontraumatic ONFH. Study patients were statistically compared with a control population of 56,811 unrelated individuals without a diagnosis of ONFH. A case-control GWAS was performed to identify single nucleotide variants (SNVs) associated with ONFH. Sensitivity analyses were performed to evaluate the association of the top SNVs with (cortico)steroid-associated ONFH and ONFH with femoral head collapse. Gene-based analyses were performed to identify potential causal genes.Results:Of the 118 patients, 114 (96.6%) had bilateral ONFH at a median of 5 years of follow-up; 90.7% had at least one 3-week steroid prescription compared with 68.3% in controls. A GWAS identified 4 SNVs reaching genomewide significance. rs116468452 nearCACNA1Ewas significantly associated with ONFH (p = 3.26 × 10−9, odds ratio [OR] = 5.6, 95% confidence interval [CI] = 3.21 to 9.76). rs10953090 inSAMD9was significantly associated with ONFH in the steroid-exposed subset (p = 2.96 × 10−8, OR = 2.57, 95% CI = 1.84 to 3.58). rs112467115 inPI4K1Bshowed enhanced association in the collapsed subset (p = 7.82 × 10−8, OR = 4.5, 95% CI = 2.60 to 7.79). Gene-based analyses identifiedPPARGC1Bas the only gene significantly associated with ONFH after Bonferroni correction (p = 1 × 10−6), with the lead SNV being rs78814834 (OR = 2.86, 95% CI = 1.87 to 4.38).Conclusions:We identified 4 SNVs and 1 gene,PPARGC1B,associated with ONFH.Level of Evidence:PrognosticLevel IV. See Instructions for Authors for a complete description of levels of evidence.

Keywords

Adult, Male, Genetic Variation, RNA-Binding Proteins, Middle Aged, Polymorphism, Single Nucleotide, Cohort Studies, Femur Head Necrosis, Case-Control Studies, Humans, Female, Aged, Genome-Wide Association Study

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
4
Top 10%
Average
Top 10%
hybrid